Zook 2016, GIAB HG002 reference materials and benchmark calls (paper 1.1)
phalaena:study:PA-DS-zook-2016-giab
Zook JM, Catoe D, McDaniel J, Vang L, Spies N, Sidow A, Weng Z, Liu Y, Mason CE, Alexander N, Henaff E, McIntyre ABR, Chandramohan D, Chen F, Jaeger E, Moshrefi A, Pham K, Stedman W, Liang T, Saghbini M, Dzakula Z, Hastie A, Cao H, Deikus G, Schadt E, Sebra R, Bashir A, Truty RM, Chang CC, Gulbahce N, Zhao K, Ghosh S, Hyland F, Fu Y, Chaisson M, Xiao C, Trow J, Sherry ST, Zaranek AW, Ball M, Bobe J, Estep P, Church GM, Marks P, Kyriazopoulou-Panagiotopoulou S, Zheng GXY, Schnall-Levin M, Ordonez HS, Mudivarti PA, Giorda K, Sheng Y, Rypdal KB, Salit M. Extensive sequencing of seven human genomes to characterize benchmark reference materials. Sci Data. 2016 Jun 7;3:160025. Phalaena slot 1.1 cites the methods report doi:10.1038/nbt.3519, pmid:27271295 (Zook JM et al. Nat Biotechnol. 2016;34:1405-1407).
- kind
- study
- organism
- NCBITaxon:9606
- assay
- Illumina short-read WGS, paired-end
- status
- reviewed
- pubmed:27271295
- doi:10.1038/nbt.3519
- insdc.sra:SRR1766443
- bioproject:PRJNA200694
- giab:NA24385
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