SRR099234, DBA/2J mouse striatum, single-end (paper 3.3)
phalaena:sample:PA-S-3-3-srr099234
The second DBA/2J striatum replicate from the Bottomly 2011 study, single-end 36 bp Illumina reads against GRCm39. Together with SRR099233 it forms the DBA/2J arm of the Phalaena four-sample slice; the C57BL/6J arm is SRR099230 and SRR099231. We use this sample in the bulk pipeline's single-end branch verification (SE Salmon quant with a supplied fragment-length distribution). It is one of the four samples that validated the SE-branch fix (validation finding #2).
- kind
- sample
- organism
- Mus musculus
- tissue
- striatum
- status
- draft
- insdc.sra:SRR099234
- geo:GSE26024
- ncbitaxon:10090
View SRR099234, DBA/2J mouse striatum, single-end (paper 3.3) on the Phalaena Wiki