SRR099231, C57BL/6J mouse striatum, single-end (paper 3.3)
phalaena:sample:PA-S-3-3-srr099231
The second C57BL/6J striatum replicate from the Bottomly 2011 study, single-end 36 bp Illumina reads against GRCm39. Together with SRR099230 it forms the C57BL/6J arm of the Phalaena four-sample slice; the DBA/2J arm is SRR099233 and SRR099234. We use this sample in the bulk pipeline's single-end branch verification (SE Salmon quant with a supplied fragment-length distribution). It is one of the four samples that validated the SE-branch fix (validation finding #2).
- kind
- sample
- organism
- Mus musculus
- tissue
- striatum
- status
- draft
- insdc.sra:SRR099231
- geo:GSE26024
- ncbitaxon:10090
View SRR099231, C57BL/6J mouse striatum, single-end (paper 3.3) on the Phalaena Wiki