Single-cell RNA-seq, E18 Mouse Heart 10x 3' v2, Wave 3 (2026-06-11)
phalaena:run:PA-R-4-6-wave3-2026-06-11
Wave 3 gap-fill run of paper 4.6 (10x Genomics 1k E18 Mouse Heart Cells, Chromium 3' v2, a 10x reference dataset). End-to-end through the cellseq pipeline (STARsolo against the mouse genome, Scrublet, Scanpy), SUCCESS at 22:23:55Z on 2026-06-10 (run id e1b844a3), 1 h 2 min wall clock. STARsolo estimated 460 cells and Scanpy resolved 10 Leiden clusters at a median of 2,716 genes per cell.
- kind
- run
- pipeline
- Single-cell RNA-seq pipeline, release p1.1
- status
- reviewed
- phalaena:run:e1b844a3
- tenx:heart_1k_v2
View Single-cell RNA-seq, E18 Mouse Heart 10x 3' v2, Wave 3 (2026-06-11) on the Phalaena Wiki